BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D09SP1|AL426031
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1496 1585 0.0
>3x_Contig1496
Length = 9544
Score = 1585 bits (799), Expect = 0.0
Identities = 800/801 (99%)
Strand = Plus / Plus
Query: 1 atggaatgtagagaatcgacaccgtctagggtggagccctttactggaacaccgatgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3987 atggaatgtagagaatcgacaccgtctagggtggagccctttactggaacaccgatgact 4046
Query: 61 ggcaacggagtcatagcagccaccatgcctggtaagtgggctgcaccaccagcaccggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4047 ggcaacggagtcatagcagccaccatgcctggtaagtgggctgcaccaccagcaccggca 4106
Query: 121 atgatggctttgataccacggttagcagcttcgatagcaaacttagacattctgtgtgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4107 atgatggctttgataccacggttagcagcttcgatagcaaacttagacattctgtgtgga 4166
Query: 181 gttctatgagcagagacgatggtcacttcatattgaatattaaaatcattcaagatatcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4167 gttctatgagcagagacgatggtcacttcatattgaatattaaaatcattcaagatatcg 4226
Query: 241 caggccttggacataaccggtagatcagagtctgatcccataataatactgatcaatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4227 caggccttggacataaccggtagatcagagtctgatcccataataatactgatcaatggt 4286
Query: 301 ctcatagacgcgccgggtagagtgaattccctggtggcgatatgttcgtaagcagcatcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4287 ctcatagacgcgccgggtagagtgaattccctggtggcgatatgttcgtaagcagcatcg 4346
Query: 361 gcatacatgatatattttagtttacgttcgcattcgctcattgaagatccaatgatatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4347 gcatacatgatatattttagtttacgttcgcattcgctcattgaagatccaatgatatta 4406
Query: 421 atgtgacccatctttctctgcggtcttgattctttaccgtaaagatatacagaggcacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4407 atgtgacccatctttctctgcggtcttgattctttaccgtaaagatatacagaggcacca 4466
Query: 481 ggtgtagatagtgctctttcacagatttgtagttctttattcttttcagcatgatcaccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4467 ggtgtagatagtgctctttcacagatttgtagttctttattcttttcagcatgatcaccc 4526
Query: 541 aagacgtttaacatgatagcgttggtgtttgtggtagacaaggcactgaacccttcaggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4527 aagacgtttaacatgatagcgttggtgtttgtggtagacaaggcactgaacccttcaggt 4586
Query: 601 aacggtaggtttaagattgaccttatgtgagcytcgaattgagaggtaacacatgcgtca 660
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4587 aacggtaggtttaagattgaccttatgtgagcttcgaattgagaggtaacacatgcgtca 4646
Query: 661 attgtataatggccagagttgtgaggtcttggagcaatttcatttatgagtaattccccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4647 attgtataatggccagagttgtgaggtcttggagcaatttcatttatgagtaattccccg 4706
Query: 721 tcttctaaatagaacatctccacaccaaagataccagcgcctgggaatgctgcaatagca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4707 tcttctaaatagaacatctccacaccaaagataccagcgcctgggaatgctgcaatagca 4766
Query: 781 tgttctgccaagagcttagct 801
|||||||||||||||||||||
Sbjct: 4767 tgttctgccaagagcttagct 4787
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4876
Number of Sequences: 1807
Number of extensions: 4876
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)